BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022E06LP1|AL427913
(986 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig184 916 0.0
>3x_Contig184
Length = 1475
Score = 916 bits (461), Expect = 0.0
Identities = 470/473 (99%)
Strand = Plus / Minus
Query: 1 attcctagtttgaaaaccaagacttaaaagagactcggagaagaggctatgatcccatat 60
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 473 attcctagtttgaaaaccaagacttatcagagactcggagaagaggctatgatcccatat 414
Query: 61 aatctaacaagtaaggctgtgaataaaactgttgacacaactgtgtcttttgctgagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aatctaacaagtaaggctgtgaataaaactgttgacacaactgtgtcttttgctgagaat 354
Query: 121 tacatttatgaaccgacccataaccaaattttaaagtttagacaatactacaatgaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tacatttatgaaccgacccataaccaaattttaaagtttagacaatactacaatgaaaaa 294
Query: 181 gtctatgacactcacggaaagccattaattagaggttcgttggatccacttgtttctcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gtctatgacactcacggaaagccattaattagaggttcgttggatccacttgtttctcct 234
Query: 241 tgtaacaaatggtacgaatctttaatcaattcttctttccctgagggtaaagaagttcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tgtaacaaatggtacgaatctttaatcaattcttctttccctgagggtaaagaagttcct 174
Query: 301 acaaatggattctctaatgaattggataggtcatttgccttaactttcaatgctattcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 acaaatggattctctaatgaattggataggtcatttgccttaactttcaatgctattcaa 114
Query: 361 agagctgcttctgttttcaataaaagatctaaggagactattttggctccatgcaattac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 agagctgcttctgttttcaataaaagatctaaggagactattttggctccatgcaattac 54
Query: 421 gttaaacatgttaacgatgtcttgaacgtaaatttggacaaccaggaggattt 473
||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 53 gttaaacatgttaacgatgtcttgaacgtaaattttgacaaccaggaggattt 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,279
Number of Sequences: 1807
Number of extensions: 10279
Number of successful extensions: 232
Number of sequences better than 1.0e-20: 1
length of query: 986
length of database: 10,358,551
effective HSP length: 16
effective length of query: 970
effective length of database: 10,329,639
effective search space: 10019749830
effective search space used: 10019749830
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)